Get data to create new ShortReadQ object after barcode trimming

Source: R/demultiplexFASTQ.R

Get data to create new ShortReadQ object after barcode trimming

get_newfastq(type, fq_R1, fq_R2)

Arguments

type	character. expType of the CapSet object
fq_R1	character. fastq Read 1
fq_R2	character. fastq Read 2

Value

A list with new R1 and R2 sequence, quality, barcode string and sample id